STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
YTHDF1YTH N6-methyladenosine RNA binding protein 1. (607 aa)    
Predicted Functional Partners:
ZFC3H1
Zinc finger C3H1-type containing.
    
 
 0.739
G3Q3Z0_GASAC
CCR4-NOT transcription complex, subunit 7.
    
 
 0.621
G3QCB5_GASAC
CCR4-NOT transcription complex, subunit 8.
    
 
 0.621
G3Q1P8_GASAC
Methyltransferase like 14; Belongs to the MT-A70-like family.
  
   
 0.611
G3P2W8_GASAC
WT1 associated protein.
  
  
 0.603
G3Q6D4_GASAC
Methyltransferase like 3; Belongs to the MT-A70-like family.
  
   
 0.558
G3NPY3_GASAC
Ubiquitin-conjugating enzyme E2Z.
   
    0.535
G3P3A9_GASAC
Vir like m6A methyltransferase associated.
    
 
 0.487
G3PV23_GASAC
Mtr4 exosome RNA helicase.
    
 
 0.476
G3PWF1_GASAC
AlkB homolog 5, RNA demethylase.
      
 0.474
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.