STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3NDP2_GASACPalmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. (365 aa)    
Predicted Functional Partners:
G3Q8L2_GASAC
Uncharacterized protein.
     
 0.688
G3NBD3_GASAC
Spindle and kinetochore associated complex subunit 1.
   
 
 0.647
G3Q9R7_GASAC
Spindle and kinetochore associated complex subunit 2.
   
 
 0.642
G3NDV6_GASAC
Uncharacterized protein.
   
 
 0.621
G3N5Y5_GASAC
Timeless circadian clock.
   
 
 0.595
G3N487_GASAC
Replication protein A3.
   
   0.585
G3P101_GASAC
Ring finger and WD repeat domain 3.
   
   0.579
SMARCAL1
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1; Belongs to the SNF2/RAD54 helicase family. SMARCAL1 subfamily.
    
 
 0.547
G3PQ13_GASAC
Zinc finger, RAN-binding domain containing 3.
    
 
 0.547
G3P3I9_GASAC
Methionine sulfoxide reductase B1b.
    
 
 0.464
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.