STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MARCHF6Membrane associated ring-CH-type finger 6. (906 aa)    
Predicted Functional Partners:
G3PNI5_GASAC
RING-CH-type domain-containing protein.
  
  
 
0.842
G3PJU3_GASAC
CCR4-NOT transcription complex, subunit 2.
    
 
 0.810
G3PT00_GASAC
NOT2_3_5 domain-containing protein.
    
 
 0.810
G3N504_GASAC
Ubiquitin-conjugating enzyme E2G 2 (UBC7 homolog, yeast); Belongs to the ubiquitin-conjugating enzyme family.
    
 
 0.801
G3NYP6_GASAC
Ubiquitin-conjugating enzyme E2, J2 (UBC6 homolog, yeast).
    
 
 0.758
G3PVF0_GASAC
Autocrine motility factor receptor b.
    
 
 0.751
G3Q4E9_GASAC
Synovial apoptosis inhibitor 1, synoviolin.
    
 
 0.751
G3PB50_GASAC
C1q and TNF related 12.
    
 
 0.749
G3P597_GASAC
Valosin containing protein; Belongs to the AAA ATPase family.
    
 
 0.740
SPATA5
Spermatogenesis associated 5.
    
 
 0.740
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.