Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G3NDQ0_GASACNedd4 binding protein 1. (872 aa)    
Predicted Functional Partners:
G3Q5Y2_GASAC
Si:ch73-252i11.1.
    
 
 0.885
G3PMC3_GASAC
NEDD8 ubiquitin like modifier, like.
    
 
 0.853
G3QA52_GASAC
Ubiquitin B.
    
 
 0.806
G3PIJ0_GASAC
Inhibitor of nuclear factor kappa B kinase regulatory subunit gamma.
    
  0.772
casp8
Uncharacterized protein; Belongs to the peptidase C14A family.
     
 0.703
G3NNZ4_GASAC
ATP synthase mitochondrial F1 complex assembly factor 1.
      
 0.680
casp10
Uncharacterized protein; Belongs to the peptidase C14A family.
     
 0.666
G3PXU4_GASAC
SEC62 homolog, preprotein translocation factor.
      
 0.612
G3PZB0_GASAC
Ring finger and CCCH-type domains 2.
   
  
 0.611
G3PHA8_GASAC
Uncharacterized protein; Belongs to the peptidase C14A family.
     
 0.608
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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