STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3NDQ1_GASACGID complex subunit 8 homolog b (S. cerevisiae). (228 aa)    
Predicted Functional Partners:
G3P3A4_GASAC
Armadillo repeat containing 8.
    
 
 0.951
G3Q324_GASAC
Required for meiotic nuclear division 5 homolog B.
    
 
 0.903
G3NFL7_GASAC
RAN binding protein 10.
   
 
 0.889
G3Q1M3_GASAC
RAN binding protein 9.
   
 
 0.889
G3PJE4_GASAC
WD repeat domain 26b.
    
 
 0.883
G3PLP9_GASAC
WD repeat domain 26a.
    
 
 0.883
G3Q327_GASAC
NEDD4 binding protein 3.
    
 
 0.880
GID4
GID complex subunit 4 homolog.
    
 
 0.879
GID4-2
GID complex subunit 4 homolog.
    
 
 0.879
SPRYD3
SPRY domain containing 3.
   
 
 0.808
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.