Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G3NDQ5_GASACCarboxymethylenebutenolidase homolog (Pseudomonas). (245 aa)    
Predicted Functional Partners:
G3N9N5_GASAC
Alcohol dehydrogenase iron containing 1.
  
 
 0.857
G3N849_GASAC
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
    
   0.855
G3NBR3_GASAC
Trafficking protein particle complex 8.
    
   0.855
G3PTL2_GASAC
Trafficking protein particle complex 13.
    
   0.855
G3PIW0_GASAC
Trafficking protein particle complex 12.
    
   0.851
G3Q690_GASAC
Trafficking protein particle complex 11.
    
   0.851
G3NM55_GASAC
Josephin domain containing 1.
      
 0.846
G3N8H8_GASAC
AIRC domain-containing protein.
  
  
 0.793
G3NUK4_GASAC
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
    
   0.770
G3P322_GASAC
WD repeat domain 90.
    
   0.767
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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