STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3NDR4_GASACDynein, axonemal, heavy chain 12. (3781 aa)    
Predicted Functional Partners:
G3P5N8_GASAC
Uncharacterized protein.
 
 
    0.862
G3N3Z8_GASAC
Dynein light chain roadblock.
   
 0.839
G3P1J3_GASAC
Dynein, axonemal, intermediate chain 1, paralog 2.
  
 0.835
G3Q8L4_GASAC
Dynein light chain.
    
 0.822
G3P823_GASAC
Dynein, axonemal, intermediate chain 2b.
   
 0.810
DYNLT3
Dynein, light chain, Tctex-type 3.
   
 0.806
G3NTF7_GASAC
Dynactin 2 (p50).
    
 0.806
G3PSD0_GASAC
Uncharacterized protein.
    
 0.805
G3NQ51_GASAC
TBC1 domain family, member 31.
   
 0.797
PAFAH1B1
Lissencephaly-1 homolog; Positively regulates the activity of the minus-end directed microtubule motor protein dynein. May enhance dynein-mediated microtubule sliding by targeting dynein to the microtubule plus end. Required for several dynein- and microtubule-dependent processes such as the maintenance of Golgi integrity, the peripheral transport of microtubule fragments and the coupling of the nucleus and centrosome. May be required for proliferation of neuronal precursors and neuronal migration; Belongs to the WD repeat LIS1/nudF family.
    
 0.792
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.