Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
G3NDS9_GASACClarin 3. (225 aa)    
Predicted Functional Partners:
G3Q0A2_GASAC
Ring finger protein 24.
      
 0.846
G3PHW7_GASAC
CACN subunit beta associated regulatory protein b.
      
 0.838
G3P0Y4_GASAC
Coiled-coil domain containing 43.
    
   0.811
G3N5G2_GASAC
Engulfment and cell motility 2.
    
 0.792
ELMO1
Engulfment and cell motility 1.
    
 0.792
G3PL02_GASAC
Engulfment and cell motility 3.
    
 0.792
CRK
CRK proto-oncogene, adaptor protein.
    
 0.790
G3Q0F8_GASAC
V-crk avian sarcoma virus CT10 oncogene homolog-like.
    
 0.790
G3QC61_GASAC
Uncharacterized protein.
    
 0.790
G3PFQ8_GASAC
Potassium channel tetramerization domain containing 9a.
      
 0.784
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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