Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G3NDT2_GASACTis11B_N domain-containing protein. (150 aa)    
Predicted Functional Partners:
MAPKAPK2
MAPK activated protein kinase 2; Belongs to the protein kinase superfamily.
    
 0.981
G3NEG4_GASAC
MAPK activated protein kinase 2b; Belongs to the protein kinase superfamily.
    
 0.981
G3PMT1_GASAC
5'-3' exoribonuclease 1.
   
 0.928
G3NDN1_GASAC
CCR4-NOT transcription complex, subunit 1.
    
 0.923
G3PJC9_GASAC
Sb:cb81.
 
   
  0.907
G3P0B0_GASAC
Zgc:114130.
     
  0.900
G3PBC1_GASAC
Zinc finger protein 36, C3H type-like 1a.
     
  0.900
G3QBC1_GASAC
Exosome component 8.
    
  0.897
G3Q3U0_GASAC
Decapping mRNA 2.
   
 0.782
G3Q3Z0_GASAC
CCR4-NOT transcription complex, subunit 7.
   
 0.750
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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