Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G3NDT7_GASACUncharacterized protein. (445 aa)    
Predicted Functional Partners:
G3NXK6_GASAC
Heterogeneous nuclear ribonucleoprotein K.
   
 0.803
G3PUV4_GASAC
Heterogeneous nuclear ribonucleoprotein K, like.
   
 0.803
G3NSE6_GASAC
Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]
    
 0.757
NCBP1
Nuclear cap binding protein subunit 1.
   
 0.752
G3Q0U4_GASAC
RRM domain-containing protein.
   
 0.686
G3Q573_GASAC
RRM domain-containing protein.
   
 0.686
G3ND78_GASAC
Uncharacterized protein.
   
 0.684
G3PFB4_GASAC
Heterogeneous nuclear ribonucleoprotein L2.
   
 0.684
G3Q7P1_GASAC
RRM domain-containing protein.
   
 0.684
G3Q9S3_GASAC
RRM domain-containing protein.
   
 0.684
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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