STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3NDU0_GASACNeurochondrin. (707 aa)    
Predicted Functional Partners:
LONP1
Lon protease homolog, mitochondrial; ATP-dependent serine protease that mediates the selective degradation of misfolded, unassembled or oxidatively damaged polypeptides as well as certain short-lived regulatory proteins in the mitochondrial matrix. May also have a chaperone function in the assembly of inner membrane protein complexes. Participates in the regulation of mitochondrial gene expression and in the maintenance of the integrity of the mitochondrial genome. Binds to mitochondrial DNA in a site-specific manner; Belongs to the peptidase S16 family. ECO:0000256|PROSITE-.
     
 0.851
LONP2
Lon protease homolog 2, peroxisomal; ATP-dependent serine protease that mediates the selective degradation of misfolded and unassembled polypeptides in the peroxisomal matrix. Necessary for type 2 peroxisome targeting signal (PTS2)-containing protein processing and facilitates peroxisome matrix protein import; Belongs to the peptidase S16 family. ECO:0000256|PROSITE-.
     
 0.848
G3NDG8_GASAC
AAR2 splicing factor.
    
 
 0.674
G3NC90_GASAC
Tetratricopeptide repeat domain 27.
    
 
 0.623
G3PSY2_GASAC
E2f-associated phosphoprotein.
    
 
 0.539
G3P3L5_GASAC
Elongation factor Tu GTP binding domain containing 2.
   
 
 0.513
G3PAD5_GASAC
Zgc:103692.
    
   0.483
G3P7G7_GASAC
Ecdysoneless homolog (Drosophila).
    
   0.480
G3P9A8_GASAC
Zinc finger, HIT-type containing 2.
    
 
 0.475
G3NME7_GASAC
MMS19 homolog, cytosolic iron-sulfur assembly component.
      
 0.456
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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