Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G3NDZ3_GASACWD repeat domain 75. (836 aa)    
Predicted Functional Partners:
G3NKA3_GASAC
UTP15 small subunit processome component.
   
 0.999
G3P7C6_GASAC
HEAT repeat containing 1.
   
 0.999
G3PHC0_GASAC
WD repeat domain 43.
   
 0.999
G3PLU0_GASAC
UTP4 small subunit processome component.
   
 0.999
G3PS11_GASAC
WD repeat domain 36.
   
 0.998
G3NM76_GASAC
Ddb1 and cul4 associated factor 13.
   
 0.997
G3NWX7_GASAC
UTP3 small subunit processome component.
   
 0.997
G3NZZ3_GASAC
WD repeat domain 3.
   
 0.997
G3P7P0_GASAC
Nucleolar protein 6.
   
 0.997
G3PKR4_GASAC
NOP58 ribonucleoprotein homolog (yeast).
   
 0.997
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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