Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G3NE18_GASACPoly(A) polymerase gamma. (743 aa)    
Predicted Functional Partners:
G3NE42_GASAC
Symplekin.
   
 0.961
G3QCM0_GASAC
PCF11 cleavage and polyadenylation factor subunit.
    
 0.957
G3P0K7_GASAC
Cleavage and polyadenylation specificity factor subunit 2.
    
 0.952
G3PU25_GASAC
Cleavage stimulation factor, 3' pre-RNA, subunit 3.
    
 0.952
G3NYA8_GASAC
Cleavage and polyadenylation specific factor 4.
    
 0.950
G3P1Y1_GASAC
Cleavage and polyadenylation specific factor 1.
   
 0.950
G3PTV6_GASAC
FIP1 like 1b (S. cerevisiae).
   
 0.949
WDR33
WD repeat domain 33.
   
 0.945
G3PZ46_GASAC
Cleavage stimulation factor, 3' pre-RNA, subunit 2.
    
 0.939
G3NVI1_GASAC
Exosome component 10.
    
 0.935
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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