Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
G3NE52_GASACSi:dkey-222n6.2; Belongs to the intermediate filament family. (436 aa)    
Predicted Functional Partners:
G3NGE0_GASAC
BCL2 associated athanogene 3.
    
 
 0.812
G3PIH4_GASAC
Uncharacterized protein; Component of intercellular desmosome junctions. Involved in the interaction of plaque proteins and intermediate filaments mediating cell-cell adhesion.
     
  0.800
G3NE53_GASAC
UBIQUITIN_CONJUGAT_2 domain-containing protein.
    
 0.662
G3NZ68_GASAC
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
  0.640
G3PFJ2_GASAC
E3 ubiquitin-protein ligase parkin; Functions within a multiprotein E3 ubiquitin ligase complex, catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins; Belongs to the RBR family. Parkin subfamily.
    
 
 0.616
G3NWF7_GASAC
Runt-related transcription factor.
    
  0.615
G3PD31_GASAC
Runt domain-containing protein.
    
  0.615
G3PFC2_GASAC
Runt-related transcription factor.
    
  0.615
G3PRA9_GASAC
Runt-related transcription factor.
    
  0.615
G3NS55_GASAC
BCL2 associated athanogene 2.
    
 
 0.597
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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