STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3NE73_GASACCysteine-rich PDZ-binding protein. (101 aa)    
Predicted Functional Partners:
G3NJ96_GASAC
Armadillo repeat containing 7.
    
 
 0.905
G3NLV0_GASAC
PHD finger protein 5A.
   
   0.881
G3NDR5_GASAC
Splicing factor 3b, subunit 3.
    
   0.877
G3P105_GASAC
Pre-mRNA processing factor 8.
    
   0.877
G3P253_GASAC
Splicing factor 3b, subunit 1.
    
   0.877
G3P5L1_GASAC
Ring finger protein 113A.
    
   0.877
G3Q5I4_GASAC
Splicing factor 3b, subunit 2.
    
   0.877
G3NQP9_GASAC
RNA binding motif protein 48.
   
 
 0.761
G3QAL6_GASAC
CWC15 spliceosome associated protein homolog.
   
   0.741
G3NLZ7_GASAC
Splicing factor 3b, subunit 6.
   
   0.737
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.