STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3NEB1_GASACTransient receptor potential cation channel, subfamily A, member 1b; Belongs to the transient receptor (TC 1.A.4) family. (1129 aa)    
Predicted Functional Partners:
G3P0S8_GASAC
Hypoxia inducible factor 1 subunit alpha inhibitor.
    
   0.877
G3NEC5_GASAC
Protein kinase C.
    
 0.819
G3P0Y3_GASAC
Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.
    
 0.819
PRKCE
Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.
    
 0.819
G3NS99_GASAC
Transient receptor potential cation channel, subfamily M, member 2.
     
 0.817
G3NSB2_GASAC
Transient receptor potential cation channel, subfamily M, member 2.
     
 0.817
G3PYG4_GASAC
Transient receptor potential cation channel, subfamily M, member 5.
     
 0.794
G3PCU6_GASAC
Transient receptor potential cation channel subfamily C member 4; Belongs to the transient receptor (TC 1.A.4) family.
   
 0.779
G3P958_GASAC
Transient receptor potential cation channel, subfamily M, member 3.
     
 0.762
G3QA45_GASAC
Transient receptor potential cation channel, subfamily V, member 1; Belongs to the transient receptor (TC 1.A.4) family.
     
0.719
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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