Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
G3NEB7_GASACMusculin (activated B-cell factor-1). (142 aa)    
Predicted Functional Partners:
G3NWI6_GASAC
LIM domain binding 1a.
    
 0.588
G3PWI4_GASAC
LIM domain binding 2a.
    
 0.588
G3Q2Z2_GASAC
LIM-domain binding 1b.
    
 0.588
TCF4
Transcription factor 4.
    
 0.575
G3NRW4_GASAC
BHLH domain-containing protein.
    
 0.575
G3PGW1_GASAC
Transcription factor 3b.
    
 0.575
G3PRC8_GASAC
Transcription factor 3a.
    
 0.575
G3PTF9_GASAC
Transcription factor 12.
    
 0.575
G3PLH2_GASAC
Core-binding factor subunit beta.
     
  0.455
G3NWF7_GASAC
Runt-related transcription factor.
    
  0.431
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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