STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGACG00000002817Nuclear receptor subfamily 0, group B, member 1 (278 aa)    
Predicted Functional Partners:
ENSGACG00000008896
Nuclear receptor subfamily 5, group A, member 2
   
0.861
FOXL2
Forkhead box L2
    
 0.781
ENSGACG00000012629
Uncharacterized protein; anti-Mullerian hormone
      
 0.775
ENSGACG00000003539
Nuclear receptor subfamily 5, group A, member 1a
   
0.736
ENSGACG00000018317
Nuclear receptor subfamily 5, group A, member 1b
   
0.729
ENSGACG00000006033
Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors
    
  0.725
ENSGACG00000020332
Androgen receptor
    
 0.710
ENSGACG00000011782
Steroidogenic acute regulatory protein
   
  
 0.698
ENSGACG00000017503
POU domain, class 5, transcription factor 3
   
 0.697
dmrt1
Uncharacterized protein; Doublesex and mab-3 related transcription factor 1 (dmrt1), mRNA
   
 
 0.694
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, Gasterosteus aculeatus, three spined stickleback, three-spined stickleback
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