STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3NEE6_GASACRibonuclease H2, subunit B. (312 aa)    
Predicted Functional Partners:
G3PU55_GASAC
Ribonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family.
   
 
 0.997
G3NQJ7_GASAC
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 
 0.894
G3PQC5_GASAC
RecQ helicase-like 4.
   
 
 0.794
G3NF03_GASAC
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Functions in the biosynthesis of the anionic phospholipids phosphatidylglycerol and cardiolipin; Belongs to the CDP-alcohol phosphatidyltransferase class-II family.
   
    0.793
G3QBA9_GASAC
Replication factor C (activator 1) 3.
   
  
 0.789
G3P9V9_GASAC
BLM RecQ like helicase.
   
 
 0.775
G3PIY1_GASAC
RecQ helicase-like 5.
   
 
 0.737
G3PR75_GASAC
DNA primase; Belongs to the eukaryotic-type primase small subunit family.
   
  
 0.683
G3N7A6_GASAC
Copine IVa.
   
 
 0.679
G3NAP5_GASAC
Copine III.
   
 
 0.679
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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