STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLCO5A1Solute carrier organic anion transporter family member. (696 aa)    
Predicted Functional Partners:
G3PD93_GASAC
Synaptojanin 2 binding protein.
    
   0.696
G3NTC9_GASAC
Solute carrier family 16 member 10.
   
 
 0.613
SLC16A2
Solute carrier family 16 member 2.
   
 
 0.613
G3P1T3_GASAC
Solute carrier organic anion transporter family member.
   
 
 
0.547
G3NNY7_GASAC
Voltage-dependent T-type calcium channel subunit alpha; Voltage-sensitive calcium channels (VSCC) mediate the entry of calcium ions into excitable cells and are also involved in a variety of calcium-dependent processes, including muscle contraction, hormone or neurotransmitter release, gene expression, cell motility, cell division and cell death. This channel gives rise to T-type calcium currents. T-type calcium channels belong to the "low-voltage activated (LVA)" group and are strongly blocked by nickel and mibefradil. A particularity of this type of channels is an opening at quite ne [...]
    
   0.463
G3PGD6_GASAC
Uncharacterized protein.
    
   0.463
G3PGP9_GASAC
Ion_trans domain-containing protein.
    
   0.463
G3PGQ2_GASAC
Uncharacterized protein.
    
   0.463
G3PX25_GASAC
Calcium channel, voltage-dependent, T type, alpha 1H subunit b.
    
   0.463
G3P8Q2_GASAC
Hepatocyte growth factor-regulated tyrosine kinase substrate.
     
 0.401
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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