Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
G3NEI4_GASACSynuclein, gamma b (breast cancer-specific protein 1); Belongs to the synuclein family. (113 aa)    
Predicted Functional Partners:
G3Q381_GASAC
Synuclein, beta; Belongs to the synuclein family.
   
 
 0.905
G3NCX8_GASAC
Apolipoprotein Ea.
    
 0.862
G3PFJ2_GASAC
E3 ubiquitin-protein ligase parkin; Functions within a multiprotein E3 ubiquitin ligase complex, catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins; Belongs to the RBR family. Parkin subfamily.
    
 
 0.860
G3NA75_GASAC
Parkinson protein 7.
    
 
 0.813
G3NGQ8_GASAC
Apolipoprotein Eb.
    
 0.787
G3QBN9_GASAC
SHSP domain-containing protein; Belongs to the small heat shock protein (HSP20) family.
    
 
 0.783
TPPP
Tubulin polymerization promoting protein.
   
 
 0.782
G3NAR4_GASAC
E3 ubiquitin-protein ligase; E3 ubiquitin-protein ligase that mediates ubiquitination and subsequent proteasomal degradation of target proteins. E3 ubiquitin ligases accept ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates.
    
 0.773
G3NDQ6_GASAC
E3 ubiquitin-protein ligase; E3 ubiquitin-protein ligase that mediates ubiquitination and subsequent proteasomal degradation of target proteins. E3 ubiquitin ligases accept ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates.
    
 0.773
G3P782_GASAC
Zgc:92912.
   
 
 0.771
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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