STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3NEL2_GASACMyozenin 1b. (247 aa)    
Predicted Functional Partners:
G3NFC4_GASAC
Junctional adhesion molecule 2b.
  
    0.501
G3NTV5_GASAC
SET and MYND domain containing 1b.
   
    0.454
G3NA19_GASAC
HTH La-type RNA-binding domain-containing protein.
   
    0.453
G3NNW2_GASAC
SHSP domain-containing protein; Belongs to the small heat shock protein (HSP20) family.
   
    0.453
G3QAE7_GASAC
Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.
   
    0.453
G3N573_GASAC
Myogenin.
   
    0.452
G3NHW2_GASAC
Si:ch211-220i18.4.
   
    0.452
G3NL09_GASAC
Homeobox D10a.
   
    0.452
G3P6I1_GASAC
Unc-45 myosin chaperone B.
   
    0.452
G3PBK5_GASAC
Sarcalumenin; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
   
    0.452
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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