STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3NEP4_GASAC8-oxoguanine DNA glycosylase. (361 aa)    
Predicted Functional Partners:
G3Q7A9_GASAC
DNA-(apurinic or apyrimidinic site) lyase; Initiates repair of AP sites in DNA by catalyzing hydrolytic incision of the phosphodiester backbone immediately adjacent to the damage, generating a single-strand break with 5'-deoxyribose phosphate and 3'-hydroxyl ends.
  
 0.915
G3P4V8_GASAC
O-6-methylguanine-DNA methyltransferase.
  
 
 0.894
G3PF93_GASAC
APEX nuclease (apurinic/apyrimidinic endonuclease) 2.
  
 0.894
G3P4E5_GASAC
Uncharacterized protein.
    
 
 0.858
G3NLE6_GASAC
Nei-like DNA glycosylase 1.
     
 0.856
G3P2R0_GASAC
Polymerase (DNA directed), eta.
  
 
 0.855
NT5E
5'-nucleotidase ecto; Belongs to the 5'-nucleotidase family.
  
 
  0.837
G3NP96_GASAC
DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).
  
 
 0.816
G3PL32_GASAC
Polymerase (DNA directed) iota.
  
 
 0.807
G3NL42_GASAC
Si:ch211-141o9.10.
   
 
 0.796
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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