STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSNK2BCasein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (225 aa)    
Predicted Functional Partners:
G3Q0Y4_GASAC
FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...]
   
  0.959
G3Q530_GASAC
SPT16 homolog, facilitates chromatin remodeling subunit.
    
  0.959
G3NW42_GASAC
Ribosomal RNA processing 7 homolog A.
    
 0.951
G3NG14_GASAC
Protein kinase domain-containing protein.
   
 0.947
G3NYE2_GASAC
Zgc:86598; Belongs to the protein kinase superfamily.
   
 0.947
G3PBW0_GASAC
Casein kinase 2, alpha 4 polypeptide; Belongs to the protein kinase superfamily.
   
 0.947
G3PT33_GASAC
Casein kinase 2, alpha prime polypeptide a; Belongs to the protein kinase superfamily.
   
 0.947
G3P7P0_GASAC
Nucleolar protein 6.
   
 0.943
RRP36
Ribosomal RNA processing 36.
    
  0.915
G3PAJ3_GASAC
Polycomb group ring finger 5a.
    
 0.881
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.