STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3NES5_GASACMIT, microtubule interacting and transport, domain containing 1. (247 aa)    
Predicted Functional Partners:
G3QAG4_GASAC
Chromatin modifying protein 1B.
    
 
 0.944
G3NIW2_GASAC
Charged multivesicular body protein 2A.
   
 
 0.663
G3NJX4_GASAC
Charged multivesicular body protein 5b.
    
 
 0.606
G3PYB2_GASAC
Charged multivesicular body protein 5a.
    
 
 0.606
G3P0P8_GASAC
Transmembrane protein 121Ab.
      
 0.591
G3NTV6_GASAC
A kinase (PRKA) anchor protein 17A.
      
 0.570
G3NS48_GASAC
Zinc finger, matrin-type 3.
   
    0.533
G3Q4H4_GASAC
Iduronate 2-sulfatase.
      
 0.515
G3NER3_GASAC
Thioredoxin domain containing 9.
   
  
 0.507
G3NER7_GASAC
Uncharacterized protein.
      
 0.504
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.