STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3NEU5_GASACBTAF1 RNA polymerase II, B-TFIID transcription factor-associated. (1847 aa)    
Predicted Functional Partners:
G3Q9A3_GASAC
DR1-associated protein 1 (negative cofactor 2 alpha).
    
 
 0.957
G3NJ98_GASAC
Down-regulator of transcription 1.
   
 
 0.941
G3PUL7_GASAC
TATA box binding protein.
   
 
 0.918
G3NIQ2_GASAC
TATA box binding protein like 2.
    
 
 0.916
G3P6X8_GASAC
Uncharacterized protein.
   
 
 0.916
G3PA81_GASAC
TBP-like 1.
    
 
 0.885
G3PD40_GASAC
SPT3 homolog, SAGA and STAGA complex component.
    
 
 0.790
SMARCA5
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5.
  
 
0.768
G3PKH7_GASAC
PHD finger protein 12b.
   
 
 0.756
LTN1
Listerin E3 ubiquitin protein ligase 1.
   
    0.718
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.