STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3NEY6_GASACRabenosyn, RAB effector. (759 aa)    
Predicted Functional Partners:
G3P6N2_GASAC
Vacuolar protein sorting 45 homolog; Belongs to the STXBP/unc-18/SEC1 family.
    
 0.997
G3P4T9_GASAC
RAB4B, member RAS oncogene family.
    
 0.982
G3PUP0_GASAC
RAB4a, member RAS oncogene family.
    
 0.982
G3Q083_GASAC
EH-domain containing 1a; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
    
 0.946
G3PIK1_GASAC
EH-domain containing 3; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
    
 0.942
G3NMN7_GASAC
RAB5A, member RAS oncogene family, a.
   
 0.926
G3NS61_GASAC
Uncharacterized protein.
   
 0.926
G3P1H5_GASAC
RAB5C, member RAS oncogene family.
   
 0.926
G3P357_GASAC
RAB5B, member RAS oncogene family.
   
 0.926
G3PHW2_GASAC
RAB5A, member RAS oncogene family, b.
   
 0.926
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.