Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
G3NEY6_GASACRabenosyn, RAB effector. (759 aa)    
Predicted Functional Partners:
G3P6N2_GASAC
Vacuolar protein sorting 45 homolog; Belongs to the STXBP/unc-18/SEC1 family.
    
 0.999
G3Q083_GASAC
EH-domain containing 1a; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
    
 0.993
G3PIK1_GASAC
EH-domain containing 3; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
    
 0.990
G3PUP0_GASAC
RAB4a, member RAS oncogene family.
    
 0.990
G3P8Q2_GASAC
Hepatocyte growth factor-regulated tyrosine kinase substrate.
    
 
 0.959
G3NMN7_GASAC
RAB5A, member RAS oncogene family, a.
    
 0.946
G3NS61_GASAC
Uncharacterized protein.
    
 0.946
G3P1H5_GASAC
RAB5C, member RAS oncogene family.
    
 0.946
G3P357_GASAC
RAB5B, member RAS oncogene family.
    
 0.946
G3PHW2_GASAC
RAB5A, member RAS oncogene family, b.
    
 0.946
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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