Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G3NEZ8_GASACTransmembrane protein 182a. (242 aa)    
Predicted Functional Partners:
G3NEY0_GASAC
Major facilitator superfamily domain containing 9.
      
 0.846
G3NEW5_GASAC
Inositol polyphosphate-4-phosphatase type I Aa.
      
 0.709
TM6SF1
Transmembrane 6 superfamily member 1.
      
 0.673
G3PQY6_GASAC
Zgc:85843.
      
 0.673
G3Q819_GASAC
Tetraspanin.
      
 0.672
G3NNT7_GASAC
Heat shock protein family, member 7 (cardiovascular); Belongs to the small heat shock protein (HSP20) family.
   
  
 0.602
G3NRZ2_GASAC
Ig-like domain-containing protein.
      
 0.548
G3PF07_GASAC
Tetratricopeptide repeat domain 36.
      
 0.548
G3PV41_GASAC
Ring finger protein 130.
      
 0.546
G3PQ91_GASAC
Inositol polyphosphate-4-phosphatase type I Ab.
      
 0.545
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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