G3NEZ8_GASAC protein (Gasterosteus aculeatus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

G3NEZ8_GASAC

Transmembrane protein 182a. (242 aa)

Predicted Functional Partners:

G3PBK5_GASAC

0.530

G3NEY0_GASAC

0.528

G3N7A2_GASAC

0.520

G3PK00_GASAC

0.515

G3NEW5_GASAC

0.475

G3Q819_GASAC

0.474

G3NTV5_GASAC

0.468

G3P6I1_GASAC

0.464

G3PY97_GASAC

0.459

G3NNH1_GASAC

0.455

Your Current Organism:

Gasterosteus aculeatus

NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
G3N7A2_GASAC	G3NEZ8_GASAC	ENSGACP00000001179	ENSGACP00000003899	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family.	Transmembrane protein 182a.	0.520
G3N7A2_GASAC	G3NTV5_GASAC	ENSGACP00000001179	ENSGACP00000008773	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family.	SET and MYND domain containing 1b.	0.508
G3N7A2_GASAC	G3P6I1_GASAC	ENSGACP00000001179	ENSGACP00000013204	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family.	Unc-45 myosin chaperone B.	0.472
G3N7A2_GASAC	G3PBK5_GASAC	ENSGACP00000001179	ENSGACP00000014979	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family.	Sarcalumenin; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	0.468
G3N7A2_GASAC	G3PK00_GASAC	ENSGACP00000001179	ENSGACP00000017930	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family.	Uncharacterized protein.	0.450
G3N7A2_GASAC	G3PY97_GASAC	ENSGACP00000001179	ENSGACP00000022587	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family.	Myomesin 1a (skelemin).	0.503
G3NEW5_GASAC	G3NEY0_GASAC	ENSGACP00000003866	ENSGACP00000003881	Inositol polyphosphate-4-phosphatase type I Aa.	Major facilitator superfamily domain containing 9.	0.632
G3NEW5_GASAC	G3NEZ8_GASAC	ENSGACP00000003866	ENSGACP00000003899	Inositol polyphosphate-4-phosphatase type I Aa.	Transmembrane protein 182a.	0.475
G3NEY0_GASAC	G3NEW5_GASAC	ENSGACP00000003881	ENSGACP00000003866	Major facilitator superfamily domain containing 9.	Inositol polyphosphate-4-phosphatase type I Aa.	0.632
G3NEY0_GASAC	G3NEZ8_GASAC	ENSGACP00000003881	ENSGACP00000003899	Major facilitator superfamily domain containing 9.	Transmembrane protein 182a.	0.528
G3NEZ8_GASAC	G3N7A2_GASAC	ENSGACP00000003899	ENSGACP00000001179	Transmembrane protein 182a.	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family.	0.520
G3NEZ8_GASAC	G3NEW5_GASAC	ENSGACP00000003899	ENSGACP00000003866	Transmembrane protein 182a.	Inositol polyphosphate-4-phosphatase type I Aa.	0.475
G3NEZ8_GASAC	G3NEY0_GASAC	ENSGACP00000003899	ENSGACP00000003881	Transmembrane protein 182a.	Major facilitator superfamily domain containing 9.	0.528
G3NEZ8_GASAC	G3NNH1_GASAC	ENSGACP00000003899	ENSGACP00000006885	Transmembrane protein 182a.	Uncharacterized protein.	0.455
G3NEZ8_GASAC	G3NTV5_GASAC	ENSGACP00000003899	ENSGACP00000008773	Transmembrane protein 182a.	SET and MYND domain containing 1b.	0.468
G3NEZ8_GASAC	G3P6I1_GASAC	ENSGACP00000003899	ENSGACP00000013204	Transmembrane protein 182a.	Unc-45 myosin chaperone B.	0.464
G3NEZ8_GASAC	G3PBK5_GASAC	ENSGACP00000003899	ENSGACP00000014979	Transmembrane protein 182a.	Sarcalumenin; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	0.530
G3NEZ8_GASAC	G3PK00_GASAC	ENSGACP00000003899	ENSGACP00000017930	Transmembrane protein 182a.	Uncharacterized protein.	0.515
G3NEZ8_GASAC	G3PY97_GASAC	ENSGACP00000003899	ENSGACP00000022587	Transmembrane protein 182a.	Myomesin 1a (skelemin).	0.459
G3NEZ8_GASAC	G3Q819_GASAC	ENSGACP00000003899	ENSGACP00000026033	Transmembrane protein 182a.	Tetraspanin.	0.474