Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
G3NF28_GASACTransgelin 3b. (291 aa)    
Predicted Functional Partners:
G3NLG0_GASAC
ZZ-type domain-containing protein.
    
   0.875
G3PUW4_GASAC
Potassium channel modulatory factor 1.
    
   0.875
G3NT04_GASAC
Ubiquitin protein ligase E3 component n-recognin 4.
    
   0.866
G3NH84_GASAC
Abhydrolase domain containing 13.
  
 
 0.757
G3N6E8_GASAC
Disco-interacting protein 2 homolog Bb.
  
 0.743
G3NAP8_GASAC
Uncharacterized protein.
  
 0.743
G3NSG2_GASAC
Disco-interacting protein 2 homolog A.
  
 0.743
G3P0M3_GASAC
Disco-interacting protein 2 homolog Ba.
  
 0.743
G3PZY2_GASAC
AMP-binding domain-containing protein.
  
 0.743
DIP2C
Disco interacting protein 2 homolog C.
  
 0.743
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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