STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3NF61_GASACZgc:153896. (449 aa)    
Predicted Functional Partners:
G3N400_GASAC
Sphingomyelin phosphodiesterase 4.
   
 
 0.872
G3NN72_GASAC
Sphingomyelin phosphodiesterase 2b, neutral membrane (neutral sphingomyelinase).
     
 0.868
G3PP99_GASAC
Nudix (nucleoside diphosphate linked moiety X)-type motif 12.
   
 0.868
G3QBG9_GASAC
Sphingomyelin phosphodiesterase; Converts sphingomyelin to ceramide.
     
 0.868
G3PC67_GASAC
Uncharacterized protein.
  
 
  0.865
G3PC70_GASAC
Uncharacterized protein.
  
 
  0.863
G3PC74_GASAC
Uncharacterized protein.
  
 
  0.863
G3PIH9_GASAC
Ceramide synthase 3b.
   
 0.859
G3NXQ6_GASAC
Alkaline ceramidase; Hydrolyzes the sphingolipid ceramide into sphingosine and free fatty acid.
   
 
 0.858
G3NE58_GASAC
Homeobox domain-containing protein.
    
 0.857
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.