STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3NF73_GASACRing finger protein 123. (595 aa)    
Predicted Functional Partners:
G3NGV2_GASAC
B30.2/SPRY domain-containing protein.
 
     0.939
G3PLI2_GASAC
UBA domain containing 1.
   
 
 0.899
G3N5N0_GASAC
Ubiquitin specific peptidase 11; Belongs to the peptidase C19 family.
   
 0.799
G3NJG0_GASAC
Ubiquitin specific peptidase 19.
   
 0.793
G3NWL2_GASAC
Ubiquitin-like modifier-activating enzyme ATG7; E1-like activating enzyme involved in the 2 ubiquitin-like systems required for cytoplasm to vacuole transport (Cvt) and autophagy. Activates ATG12 for its conjugation with ATG5 as well as the ATG8 family proteins for their conjugation with phosphatidylethanolamine. Both systems are needed for the ATG8 association to Cvt vesicles and autophagosomes membranes. Required for autophagic death induced by caspase-8 inhibition. Required for mitophagy which contributes to regulate mitochondrial quantity and quality by eliminating the mitochondria [...]
     
 0.695
G3N760_GASAC
Ubiquitin carboxyl-terminal hydrolase.
   
 0.635
G3PTW9_GASAC
Ubiquitin carboxyl-terminal hydrolase.
   
 0.635
G3PW74_GASAC
Ubiquitin carboxyl-terminal hydrolase.
   
 0.635
USP15
Ubiquitin carboxyl-terminal hydrolase.
   
 0.635
G3PLM6_GASAC
Ubiquitin specific peptidase 31; Belongs to the peptidase C19 family.
   
 0.629
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.