STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3NF91_GASACRAD23 homolog A, nucleotide excision repair protein b. (402 aa)    
Predicted Functional Partners:
G3N9I3_GASAC
Myb-like, SWIRM and MPN domains 1.
   
 0.992
G3NZ68_GASAC
Ubiquitin A-52 residue ribosomal protein fusion product 1.
   
 0.965
G3NQD4_GASAC
Xeroderma pigmentosum, complementation group C.
   
 0.960
G3NZ69_GASAC
N-glycanase 1.
    
 0.958
G3QA52_GASAC
Ubiquitin B.
    
 0.943
G3NQR2_GASAC
TNF receptor-associated factor 7.
    
 0.942
PSMD2
26S proteasome non-ATPase regulatory subunit 2; Component of the 26S proteasome, a multiprotein complex involved in the ATP-dependent degradation of ubiquitinated proteins. This complex plays a key role in the maintenance of protein homeostasis by removing misfolded or damaged proteins, which could impair cellular functions, and by removing proteins whose functions are no longer required. Therefore, the proteasome participates in numerous cellular processes, including cell cycle progression, apoptosis, or DNA damage repair; Belongs to the proteasome subunit S2 family.
    
 0.941
G3NX84_GASAC
Thyroid hormone receptor interactor 12.
    
 0.934
G3NUM7_GASAC
40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.
   
 0.932
G3N5R5_GASAC
NBR1 autophagy cargo receptor b.
   
 0.930
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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