STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3NF96_GASACSyndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family. (205 aa)    
Predicted Functional Partners:
G3PQW8_GASAC
Uncharacterized protein.
   
 
 0.854
G3NVG6_GASAC
Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family.
  
  
 
0.849
G3NQF2_GASAC
Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family.
  
 
 
0.847
G3PH53_GASAC
Transforming growth factor beta; Belongs to the TGF-beta family.
     
 0.724
G3Q8G5_GASAC
Decorin; May affect the rate of fibrils formation.
   
 
 0.666
G3QB08_GASAC
Vitronectin b.
   
 
 0.656
G3P167_GASAC
Vitronectin a.
     
 0.651
EZR
Ezrin a.
     
 0.618
EZR-2
Ezrin b.
     
 0.618
RDX
Radixin.
     
 0.618
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.