STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3NF98_GASACNicolin 1. (216 aa)    
Predicted Functional Partners:
LRRC49
Leucine rich repeat containing 49.
   
 0.921
G3P1U8_GASAC
Tubulin polyglutamylase complex subunit 2.
   
 0.917
G3P5Y7_GASAC
Uncharacterized protein.
   
 0.916
G3Q8M3_GASAC
Tubulin tyrosine ligase-like family, member 1.
   
 0.904
G3NF66_GASAC
Tubulin tyrosine ligase.
   
 0.823
G3NE37_GASAC
Si:ch211-189k9.2.
    
   0.803
G3Q6J7_GASAC
TBC1 domain family, member 19.
    
   0.803
G3PLY2_GASAC
Zgc:92873.
   
   0.788
G3NQQ2_GASAC
Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine; Belongs to the GcvT family.
 
 
  
 0.744
G3P592_GASAC
Uncharacterized protein.
   
 0.666
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.