Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G3NF98_GASACNicolin 1. (216 aa)    
Predicted Functional Partners:
G3P1U8_GASAC
Tubulin polyglutamylase complex subunit 2.
    
 0.992
G3P5Y7_GASAC
Uncharacterized protein.
    
 0.992
G3Q8M3_GASAC
Tubulin tyrosine ligase-like family, member 1.
   
 0.992
G3NE37_GASAC
Si:ch211-189k9.2.
    
   0.974
G3PLY2_GASAC
Zgc:92873.
    
   0.974
G3Q6J7_GASAC
TBC1 domain family, member 19.
    
   0.974
LRRC49
Leucine rich repeat containing 49.
    
 0.972
G3NF66_GASAC
Tubulin tyrosine ligase.
   
 0.885
G3QCH8_GASAC
SMG8 nonsense mediated mRNA decay factor.
    
   0.864
G3P5X4_GASAC
FtsJ RNA 2'-O-methyltransferase 3.
      
 0.831
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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