STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3NFA7_GASACUDP-glucuronate decarboxylase 1. (419 aa)    
Predicted Functional Partners:
G3PUR2_GASAC
UDP-glucose 6-dehydrogenase; Involved in the biosynthesis of glycosaminoglycans; hyaluronan, chondroitin sulfate, and heparan sulfate. Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
 0.997
G3PH76_GASAC
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.957
G3NIJ0_GASAC
GDP-mannose pyrophosphorylase B.
  
 0.949
G3NVL3_GASAC
UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
  
0.935
G3NMS6_GASAC
GDP-mannose 4,6-dehydratase.
  
0.932
G3PN12_GASAC
NAD(P)-bd_dom domain-containing protein.
 
 
0.931
G3NVN1_GASAC
GDP-mannose pyrophosphorylase Ab.
  
 0.915
G3Q163_GASAC
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
 
 
 0.914
GDPGP1
GDP-D-glucose phosphorylase 1.
   
 
 0.902
G3PEY0_GASAC
Hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase).
  
 0.900
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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