Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G3NFD3_GASACUncharacterized protein; Belongs to the tropomyosin family. (250 aa)    
Predicted Functional Partners:
G3N6H3_GASAC
Uncharacterized protein.
   
 0.840
G3NTN9_GASAC
Myosin, light chain 1, alkali; skeletal, fast.
   
 0.840
G3P8W9_GASAC
Cardiac myosin light chain-1.
   
 0.818
G3NN17_GASAC
Troponin I type 1b (skeletal, slow).
   
 0.775
G3P5G8_GASAC
Troponin I type 1a (skeletal, slow).
   
 0.775
G3PWD7_GASAC
Uncharacterized protein.
   
 0.774
G3P073_GASAC
Troponin I type 2a (skeletal, fast), tandem duplicate 1.
   
 0.769
TNNI2
Uncharacterized protein.
   
 0.769
TNNI2-2
Troponin I2, fast skeletal type.
   
 0.769
G3PZ59_GASAC
Uncharacterized protein.
   
 0.769
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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