Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G3NFD4_GASACC-type lectin domain family 3, member Bb. (198 aa)    
Predicted Functional Partners:
G3P5I9_GASAC
Uncharacterized protein.
   
 0.807
G3PKN8_GASAC
Tenascin N.
    
 0.698
G3PF08_GASAC
Uncharacterized protein.
   
 
 0.690
G3NNT0_GASAC
Tenascin C.
    
  0.681
G3NYT0_GASAC
Uncharacterized protein.
    
  0.681
G3PKN2_GASAC
Tenascin R (restrictin, janusin).
    
  0.681
G3PTD5_GASAC
Zmp:0000000846.
    
  0.681
G3PQV3_GASAC
Secreted phosphoprotein 2.
   
 
 0.664
G3P3E5_GASAC
Layilin b.
      
 0.594
LAYN
Layilin a.
      
 0.594
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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