Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
G3NFG0_GASACGeneral transcription factor IIIA, b. (324 aa)    
Predicted Functional Partners:
G3P8Q0_GASAC
DNA-directed RNA polymerase III subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs.
    
 0.743
G3NF28_GASAC
Transgelin 3b.
   
 
 0.708
G3QBT6_GASAC
Homeobox domain-containing protein.
    
 
 0.703
G3NRQ7_GASAC
NME/NM23 family member 8; Belongs to the NDK family.
    
 0.656
G3Q8H0_GASAC
WD repeat domain 83 opposite strand.
      
 0.639
G3Q8H3_GASAC
WD repeat domain containing 83.
   
 0.631
G3N9I3_GASAC
Myb-like, SWIRM and MPN domains 1.
    
  0.616
G3NVC8_GASAC
POC1 centriolar protein A.
    
 0.616
SBSPON
Somatomedin B and thrombospondin type 1 domain containing.
    
 
 0.593
G3Q3K3_GASAC
Zgc:165573.
    
 0.558
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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