Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
G3NFG4_GASACSolute carrier family 38 member 8a. (447 aa)    
Predicted Functional Partners:
G3PIS9_GASAC
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 2.
    
 0.695
GAN
Gigaxonin.
      
 0.688
G3QAG7_GASAC
Ras-related GTP binding A.
    
 0.684
G3N6D2_GASAC
SVOP-like.
      
 0.640
G3NYI5_GASAC
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 1.
    
 0.636
G3P091_GASAC
Biogenesis of lysosome-related organelles complex 1 subunit 3; Component of the BLOC-1 complex, a complex that is required for normal biogenesis of lysosome-related organelles (LRO). Belongs to the BLOC1S3 family.
      
 0.635
G3PNZ9_GASAC
Vacuolar proton pump subunit B; Non-catalytic subunit of the peripheral V1 complex of vacuolar ATPase; Belongs to the ATPase alpha/beta chains family.
    
 0.621
G3NAS0_GASAC
Zinc finger and BTB domain containing 22b.
    
 0.608
G3ND87_GASAC
Zinc finger and BTB domain containing 22a.
    
 0.608
G3Q682_GASAC
Solute carrier family 13 member 4.
   
 
 0.605
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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