Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
G3NFH4_GASACTransmembrane protein 42b. (155 aa)    
Predicted Functional Partners:
G3PNF2_GASAC
Uncharacterized protein.
    
 
 0.707
G3N644_GASAC
Uncharacterized protein.
      
 0.694
G3NZ66_GASAC
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.683
G3P2F4_GASAC
Ubiquitin-conjugating enzyme E2Ia; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.683
G3Q8F0_GASAC
Glycoprotein hormones alpha chain; Belongs to the glycoprotein hormones subunit alpha family.
     
 0.651
G3NV42_GASAC
Glycoprotein (transmembrane) nmb.
      
 0.624
G3NSS2_GASAC
Signal recognition particle 14.
      
 0.617
G3NM49_GASAC
Notochord homeobox.
      
 0.615
G3NJG9_GASAC
Potassium channel tetramerization domain containing 2.
    
  0.509
G3NFG9_GASAC
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
      
 0.473
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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