Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G3NFI4_GASACUncharacterized protein. (252 aa)    
Predicted Functional Partners:
G3PYS6_GASAC
Developmentally regulated GTP binding protein 1.
   
   0.904
G3Q6T0_GASAC
Neuralized E3 ubiquitin protein ligase 4.
     
 0.856
G3NKE0_GASAC
Uncharacterized protein.
     
 0.796
ELOB
Elongin B.
    
 0.773
G3PK45_GASAC
Elongin B.
    
 0.773
G3Q9C2_GASAC
Kelch-like family, member 42.
     
 0.744
G3NXT5_GASAC
Ring-box 1, E3 ubiquitin protein ligase.
    
 0.721
G3NE47_GASAC
Elongin C paralog a; Belongs to the SKP1 family.
    
 0.719
G3Q6R2_GASAC
Ankyrin repeat and SOCS box containing 13a, tandem duplicate 2.
     
 0.701
ZRANB1
Zinc finger RANBP2-type containing 1.
    
   0.695
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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