Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G3NFI5_GASACDCN1-like protein. (260 aa)    
Predicted Functional Partners:
G3NC07_GASAC
Ubiquitin-conjugating enzyme E2F (putative); Belongs to the ubiquitin-conjugating enzyme family.
    
 0.959
G3NPM0_GASAC
Cullin 1b; Belongs to the cullin family.
   
 0.954
G3NXT5_GASAC
Ring-box 1, E3 ubiquitin protein ligase.
    
 0.952
G3NAC9_GASAC
Cullin 2; Belongs to the cullin family.
   
 0.936
G3PMC3_GASAC
NEDD8 ubiquitin like modifier, like.
    
 0.932
G3PJ15_GASAC
CULLIN_2 domain-containing protein; Belongs to the cullin family.
   
 0.913
CUL5
Cullin 5; Belongs to the cullin family.
   
 0.913
G3NY10_GASAC
CULLIN_2 domain-containing protein; Belongs to the cullin family.
   
 0.909
CUL3
Cullin 3; Belongs to the cullin family.
   
 0.909
G3QA52_GASAC
Ubiquitin B.
    
 0.882
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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