STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3NFK6_GASACMethyltransf_25 domain-containing protein. (245 aa)    
Predicted Functional Partners:
G3N7T4_GASAC
Bystin-like.
   
 0.978
G3P9S3_GASAC
TSR1 ribosome maturation factor.
   
 0.973
G3PXS4_GASAC
tRNA methyltransferase subunit 11-2.
   
 0.972
G3Q8A0_GASAC
LTV1 ribosome biogenesis factor.
   
 0.971
G3PH76_GASAC
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
  0.968
G3Q005_GASAC
RNA-binding protein NOB1; May play a role in mRNA degradation. Belongs to the NOB1 family.
   
 0.960
G3PDV0_GASAC
Ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.
    
 0.946
G3Q163_GASAC
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
  
 0.940
G3NU97_GASAC
Ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family.
   
  0.939
G3NIG2_GASAC
Ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family.
  
  0.938
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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