Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G3NFL9_GASACLeucine rich repeat containing 59. (314 aa)    
Predicted Functional Partners:
G3Q8E3_GASAC
Staphylococcal nuclease domain-containing protein; Endonuclease that mediates miRNA decay of both protein-free and AGO2-loaded miRNAs.
   
 
 0.965
G3P7K2_GASAC
Heterogeneous nuclear ribonucleoprotein M.
   
 
 0.804
G3NSH7_GASAC
Interleukin enhancer binding factor 3b.
    
   0.799
G3P2T7_GASAC
Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum.
    
 
 0.782
G3PAS8_GASAC
SEC63 homolog, protein translocation regulator.
   
   0.779
G3N8X4_GASAC
Staufen double-stranded RNA binding protein 1.
    
   0.775
G3NE60_GASAC
Staufen double-stranded RNA binding protein 2.
    
   0.775
G3NKK9_GASAC
Transcriptional regulator; Transcription factor that binds DNA in a non-specific manner, yet also specifically recognizes the core sequence 5'-CAC[GA]TG-3'. Activates the transcription of growth-related genes.
    
   0.752
G3NT55_GASAC
Y box binding protein 1.
    
   0.737
YBX2
Y-box binding protein 2.
    
   0.737
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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