STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3NFP6_GASACSideroflexin 4. (314 aa)    
Predicted Functional Partners:
G3NWT9_GASAC
Cytochrome c oxidase assembly homolog 15 (yeast).
   
 
 0.705
G3NFB7_GASAC
Sidoreflexin.
  
 
 
0.701
TSFM
Elongation factor Ts, mitochondrial; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family.
   
  
 0.642
G3PHT2_GASAC
Outer mitochondrial membrane lipid metabolism regulator OPA3.
      
 0.633
G3Q038_GASAC
NADH:ubiquinone oxidoreductase subunit B.
   
 
 0.630
G3PRY8_GASAC
SPG7 matrix AAA peptidase subunit, paraplegin.
    
 
 0.597
G3PEV5_GASAC
NADH:ubiquinone oxidoreductase complex assembly factor 1.
     
 0.588
G3PH62_GASAC
Solute carrier family 66 member 3.
      
 0.583
G3PLM0_GASAC
Translocase of inner mitochondrial membrane domain containing 1.
    
 
 0.581
G3P7T2_GASAC
EMG1 N1-specific pseudouridine methyltransferase.
   
  
 0.560
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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