STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3NFP6_GASACSideroflexin 4. (314 aa)    
Predicted Functional Partners:
G3NMK6_GASAC
RAB25, member RAS oncogene family a.
    
 0.636
G3PFY0_GASAC
RAB, member of RAS oncogene family-like 2.
    
 0.636
G3PIU0_GASAC
RAB25, member RAS oncogene family b.
    
 0.636
G3PIW9_GASAC
RAB11a, member RAS oncogene family, like.
    
 0.636
G3PJ21_GASAC
Uncharacterized protein.
    
 0.636
G3PS45_GASAC
Uncharacterized protein.
    
 0.636
TSFM
Elongation factor Ts, mitochondrial; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family.
   
  
 0.506
G3QAE1_GASAC
Apoptosis inducing factor mitochondrion associated 1.
    
 
 0.445
G3NFB7_GASAC
Sidoreflexin.
  
 
 
0.437
G3NFT6_GASAC
Mitochondrial import inner membrane translocase subunit TIM23; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.
   
 
 0.432
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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