G3NFP7_GASAC protein (Gasterosteus aculeatus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

G3NFP7_GASAC

Immunoglobulin-like domain containing receptor 2. (538 aa)

Predicted Functional Partners:

G3ND14_GASAC

0.548

G3P094_GASAC

0.534

G3PVZ0_GASAC

0.534

G3Q2G5_GASAC

0.506

G3Q2Y3_GASAC

0.486

G3N4P3_GASAC

0.476

G3P546_GASAC

0.476

G3P570_GASAC

0.476

G3P573_GASAC

0.476

G3Q9N6_GASAC

0.476

Your Current Organism:

Gasterosteus aculeatus

NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
G3N4P3_GASAC	G3NFP7_GASAC	ENSGACP00000000263	ENSGACP00000004152	DUF1943 domain-containing protein.	Immunoglobulin-like domain containing receptor 2.	0.476
G3N4P3_GASAC	G3P546_GASAC	ENSGACP00000000263	ENSGACP00000012719	DUF1943 domain-containing protein.	Apolipoprotein Bb, tandem duplicate 2.	0.544
G3N4P3_GASAC	G3P570_GASAC	ENSGACP00000000263	ENSGACP00000012743	DUF1943 domain-containing protein.	Vitellogenin domain-containing protein.	0.551
G3ND14_GASAC	G3NFP7_GASAC	ENSGACP00000003214	ENSGACP00000004152	Leucine-rich repeat, immunoglobulin-like and transmembrane domains 1b.	Immunoglobulin-like domain containing receptor 2.	0.548
G3ND14_GASAC	G3P094_GASAC	ENSGACP00000003214	ENSGACP00000011017	Leucine-rich repeat, immunoglobulin-like and transmembrane domains 1b.	Leucine-rich repeat, immunoglobulin-like and transmembrane domains 1a.	0.484
G3ND14_GASAC	G3PVZ0_GASAC	ENSGACP00000003214	ENSGACP00000021779	Leucine-rich repeat, immunoglobulin-like and transmembrane domains 1b.	Info leucine-rich repeat, immunoglobulin-like and transmembrane domains 3a.	0.537
G3ND14_GASAC	G3Q2Y3_GASAC	ENSGACP00000003214	ENSGACP00000024232	Leucine-rich repeat, immunoglobulin-like and transmembrane domains 1b.	Junction plakoglobin a.	0.426
G3NFP7_GASAC	G3N4P3_GASAC	ENSGACP00000004152	ENSGACP00000000263	Immunoglobulin-like domain containing receptor 2.	DUF1943 domain-containing protein.	0.476
G3NFP7_GASAC	G3ND14_GASAC	ENSGACP00000004152	ENSGACP00000003214	Immunoglobulin-like domain containing receptor 2.	Leucine-rich repeat, immunoglobulin-like and transmembrane domains 1b.	0.548
G3NFP7_GASAC	G3P094_GASAC	ENSGACP00000004152	ENSGACP00000011017	Immunoglobulin-like domain containing receptor 2.	Leucine-rich repeat, immunoglobulin-like and transmembrane domains 1a.	0.534
G3NFP7_GASAC	G3P546_GASAC	ENSGACP00000004152	ENSGACP00000012719	Immunoglobulin-like domain containing receptor 2.	Apolipoprotein Bb, tandem duplicate 2.	0.476
G3NFP7_GASAC	G3P570_GASAC	ENSGACP00000004152	ENSGACP00000012743	Immunoglobulin-like domain containing receptor 2.	Vitellogenin domain-containing protein.	0.476
G3NFP7_GASAC	G3P573_GASAC	ENSGACP00000004152	ENSGACP00000012746	Immunoglobulin-like domain containing receptor 2.	Uncharacterized protein.	0.476
G3NFP7_GASAC	G3PVZ0_GASAC	ENSGACP00000004152	ENSGACP00000021779	Immunoglobulin-like domain containing receptor 2.	Info leucine-rich repeat, immunoglobulin-like and transmembrane domains 3a.	0.534
G3NFP7_GASAC	G3Q2G5_GASAC	ENSGACP00000004152	ENSGACP00000024064	Immunoglobulin-like domain containing receptor 2.	Phosphatidylinositol glycan anchor biosynthesis, class O.	0.506
G3NFP7_GASAC	G3Q2Y3_GASAC	ENSGACP00000004152	ENSGACP00000024232	Immunoglobulin-like domain containing receptor 2.	Junction plakoglobin a.	0.486
G3NFP7_GASAC	G3Q9N6_GASAC	ENSGACP00000004152	ENSGACP00000026601	Immunoglobulin-like domain containing receptor 2.	DUF1943 domain-containing protein.	0.476
G3P094_GASAC	G3ND14_GASAC	ENSGACP00000011017	ENSGACP00000003214	Leucine-rich repeat, immunoglobulin-like and transmembrane domains 1a.	Leucine-rich repeat, immunoglobulin-like and transmembrane domains 1b.	0.484
G3P094_GASAC	G3NFP7_GASAC	ENSGACP00000011017	ENSGACP00000004152	Leucine-rich repeat, immunoglobulin-like and transmembrane domains 1a.	Immunoglobulin-like domain containing receptor 2.	0.534
G3P094_GASAC	G3PVZ0_GASAC	ENSGACP00000011017	ENSGACP00000021779	Leucine-rich repeat, immunoglobulin-like and transmembrane domains 1a.	Info leucine-rich repeat, immunoglobulin-like and transmembrane domains 3a.	0.537