Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
G3NFP9_GASACEomesodermin homolog a. (648 aa)    
Predicted Functional Partners:
G3PBM4_GASAC
Mix paired-like homeobox.
   
 0.838
G3NK71_GASAC
SRY-box transcription factor 17.
    
 0.776
G3PZ16_GASAC
GATA binding protein 6.
    
 0.721
SOX18
SRY-box transcription factor 18.
    
 0.705
G3NIQ8_GASAC
Trichorhinophalangeal syndrome I.
    
 0.703
G3PZT5_GASAC
POU domain protein.
   
 0.696
G3NV84_GASAC
Forkhead box A2.
   
 0.683
G3PDL8_GASAC
Fork-head domain-containing protein.
   
 0.683
G3PRJ8_GASAC
Early growth response 2b.
   
 
 0.669
G3NK14_GASAC
Fork-head domain-containing protein.
   
 0.658
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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