Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G3NFR5_GASACMicrotubule-associated protein 1 light chain 3 beta. (126 aa)    
Predicted Functional Partners:
G3PV31_GASAC
Sequestosome 1.
   
 0.997
G3PRD2_GASAC
Autophagy-related protein 3.
   
 0.996
G3NAB1_GASAC
Autophagy protein 5; Involved in autophagic vesicle formation.
    
 0.995
G3P8T6_GASAC
Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family.
   
 0.991
G3NL32_GASAC
Cysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy; Belongs to the peptidase C54 family.
   
 0.990
G3Q620_GASAC
Optineurin.
   
 0.987
G3NIM8_GASAC
SKICH domain-containing protein.
   
 0.984
G3P3Y2_GASAC
Uncharacterized protein.
    
 0.982
FUNDC1
FUN14 domain containing 1.
    
 0.982
atg6
Uncharacterized protein.
   
 0.981
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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