Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G3NFR9_GASACUbiquitin-like domain-containing protein. (382 aa)    
Predicted Functional Partners:
G3Q4E9_GASAC
Synovial apoptosis inhibitor 1, synoviolin.
   
 
 0.801
G3PVF0_GASAC
Autocrine motility factor receptor b.
   
 
 0.795
G3PI80_GASAC
SEL1L adaptor subunit of ERAD E3 ubiquitin ligase.
    
 
 0.680
G3Q8K1_GASAC
Activating transcription factor 4a.
   
 
 0.617
G3NJC6_GASAC
DnaJ heat shock protein family (Hsp40) member B9a.
   
  
 0.594
G3Q517_GASAC
DnaJ heat shock protein family (Hsp40) member B9b.
   
  
 0.594
G3PF84_GASAC
alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.
   
  
 0.587
G3NPH4_GASAC
Membrane-bound transcription factor peptidase, site 2.
      
 0.552
G3Q1P1_GASAC
Zinc finger protein 622.
      
 0.551
G3PWI0_GASAC
Heat shock protein 5; Belongs to the heat shock protein 70 family.
   
 
 0.538
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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