STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3NFS2_GASACZinc finger, CCHC domain containing 14. (835 aa)    
Predicted Functional Partners:
G3P2K4_GASAC
Terminal nucleotidyltransferase 4A.
   
 
 0.809
G3NTG6_GASAC
Uncharacterized protein.
   
 
 0.808
G3PWU6_GASAC
Terminal nucleotidyltransferase 4B.
   
 
 0.808
G3PV23_GASAC
Mtr4 exosome RNA helicase.
   
 
 0.750
G3PZV9_GASAC
Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.
   
   0.676
G3PCT2_GASAC
Zinc finger CCCH-type containing 15.
   
   0.605
G3N7W3_GASAC
Protein MAK16 homolog; Belongs to the MAK16 family.
   
   0.604
G3NRQ6_GASAC
Ribosomal L24 domain containing 1.
   
   0.587
G3Q180_GASAC
Pumilio RNA-binding family member 3.
   
 
 0.574
HABP4
Hyaluronan binding protein 4.
   
 
 0.568
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.